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FETCH3.14 documentation

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Site Navigation

  • Getting Started
  • User guide
  • Developer guide
  • Quick reference
  • Troubleshooting
  • Change log
  • Code reference

Section Navigation

  • fetch3.canopy
    • fetch3.canopy.calc_LAD
  • fetch3.generate_config
    • fetch3.generate_config.generate_config_from_csv
  • fetch3.initial_conditions
    • fetch3.initial_conditions.calc_potential_vangenuchten
    • fetch3.initial_conditions.initial_conditions
  • fetch3.met_data
    • fetch3.met_data.calc_NETRAD
    • fetch3.met_data.calc_delta
    • fetch3.met_data.calc_esat
    • fetch3.met_data.calc_infiltration_rate
    • fetch3.met_data.calc_model_time_grid
    • fetch3.met_data.import_ameriflux_data
    • fetch3.met_data.interp_to_model_res
    • fetch3.met_data.prepare_ameriflux_data
    • fetch3.met_data.prepare_met_data
    • fetch3.met_data.Met
  • fetch3.model_config
    • fetch3.model_config.config_from_groupers
    • fetch3.model_config.get_enum
    • fetch3.model_config.get_multi_config
    • fetch3.model_config.get_single_config
    • fetch3.model_config.save_calculated_params
    • fetch3.model_config.BaseParameters
    • fetch3.model_config.ConfigParams
    • fetch3.model_config.ModelOptions
    • fetch3.model_config.NHLModelOptions
    • fetch3.model_config.NHLParameters
    • fetch3.model_config.PMParameters
    • fetch3.model_config.TranspirationScheme
  • fetch3.model_functions
    • fetch3.model_functions.Picard
    • fetch3.model_functions.Porous_media_root
    • fetch3.model_functions.Porous_media_xylem
    • fetch3.model_functions.combine_outputs
    • fetch3.model_functions.format_model_output
    • fetch3.model_functions.save_csv
    • fetch3.model_functions.save_nc
    • fetch3.model_functions.slice_dsall
    • fetch3.model_functions.vanGenuchten
  • fetch3.model_setup
    • fetch3.model_setup.spatial_discretization
    • fetch3.model_setup.temporal_discretization
    • fetch3.model_setup.Zind
  • fetch3.nhl_transpiration
    • fetch3.nhl_transpiration.NHL_functions
      • fetch3.nhl_transpiration.NHL_functions.calc_Kg
      • fetch3.nhl_transpiration.NHL_functions.calc_LAI_vertical
      • fetch3.nhl_transpiration.NHL_functions.calc_NHL
      • fetch3.nhl_transpiration.NHL_functions.calc_NHL_timesteps
      • fetch3.nhl_transpiration.NHL_functions.calc_esat
      • fetch3.nhl_transpiration.NHL_functions.calc_gb
      • fetch3.nhl_transpiration.NHL_functions.calc_geff
      • fetch3.nhl_transpiration.NHL_functions.calc_gs_Leuning
      • fetch3.nhl_transpiration.NHL_functions.calc_mixing_length
      • fetch3.nhl_transpiration.NHL_functions.calc_nighttime_trans
      • fetch3.nhl_transpiration.NHL_functions.calc_rad_attenuation
      • fetch3.nhl_transpiration.NHL_functions.calc_respiration
      • fetch3.nhl_transpiration.NHL_functions.calc_stem_wp_response
      • fetch3.nhl_transpiration.NHL_functions.calc_transpiration_leaf
      • fetch3.nhl_transpiration.NHL_functions.calc_transpiration_nhl
      • fetch3.nhl_transpiration.NHL_functions.calc_vpd_kPa
      • fetch3.nhl_transpiration.NHL_functions.calc_zenith_angle
      • fetch3.nhl_transpiration.NHL_functions.solve_C_closure
      • fetch3.nhl_transpiration.NHL_functions.solve_Uz
      • fetch3.nhl_transpiration.NHL_functions.solve_leaf_physiology
      • fetch3.nhl_transpiration.NHL_functions.thomas_tridiagonal
      • fetch3.nhl_transpiration.NHL_functions.write_outputs
      • fetch3.nhl_transpiration.NHL_functions.write_outputs_netcdf
    • fetch3.nhl_transpiration.main
      • fetch3.nhl_transpiration.main.main
      • fetch3.nhl_transpiration.main.write_nhl_output
    • fetch3.nhl_transpiration.main_standalone
      • fetch3.nhl_transpiration.main_standalone.run_single
    • fetch3.nhl_transpiration.nhl_config
      • fetch3.nhl_transpiration.nhl_config.read_configs
      • fetch3.nhl_transpiration.nhl_config.ConfigParams
  • fetch3.optimize
  • fetch3.pm_transpiration
    • fetch3.pm_transpiration.calc_gc
    • fetch3.pm_transpiration.calc_gs
    • fetch3.pm_transpiration.calc_pm_transpiration
    • fetch3.pm_transpiration.jarvis_fTa
    • fetch3.pm_transpiration.jarvis_fd
    • fetch3.pm_transpiration.jarvis_fleaf
    • fetch3.pm_transpiration.jarvis_fs
    • fetch3.pm_transpiration.night_trans
    • fetch3.pm_transpiration.pm_trans
  • fetch3.roots
    • fetch3.roots.calc_root_K
    • fetch3.roots.feddes_root_stress
    • fetch3.roots.verma_root_mass_dist
  • fetch3.run
    • fetch3.run.run_single
  • fetch3.sapflux
    • fetch3.sapflux.calc_sap_storage
    • fetch3.sapflux.calc_sapflux
    • fetch3.sapflux.calc_xylem_theta
    • fetch3.sapflux.format_inputs
  • fetch3.scaling
    • fetch3.scaling.calc_Aind_x
    • fetch3.scaling.calc_LAIc_sp
    • fetch3.scaling.calc_xylem_cross_sectional_area
    • fetch3.scaling.convert_sapflux_cm3hr_to_m3s
    • fetch3.scaling.convert_sapflux_cm3hr_to_mm30min
    • fetch3.scaling.convert_sapflux_m3s_to_mm30min
    • fetch3.scaling.convert_trans2d_to_cm3hr
    • fetch3.scaling.convert_trans_m3s_to_cm3hr
    • fetch3.scaling.integrate_trans2d
    • fetch3.scaling.trans2d_to_tree
  • fetch3.tests
    • fetch3.tests.conftest
      • fetch3.tests.conftest.model_config
      • fetch3.tests.conftest.model_pm_config
      • fetch3.tests.conftest.opt_model_config
      • fetch3.tests.conftest.param_groups_config
      • fetch3.tests.conftest.pytest_addoption
    • fetch3.tests.test_load_config
      • fetch3.tests.test_load_config.test_config_from_groupers
      • fetch3.tests.test_load_config.test_deprecated_config
      • fetch3.tests.test_load_config.test_get_multi_config
    • fetch3.tests.test_loaded_data
      • fetch3.tests.test_loaded_data.test_output_data_should_be_the_same_as_previously_stored_data
  • fetch3.utils
    • fetch3.utils.deprecation
    • fetch3.utils.get_dt_now_as_str
    • fetch3.utils.interpolate_2d
    • fetch3.utils.load_yaml
    • fetch3.utils.make_experiment_directory
    • fetch3.utils.neg2zero

fetch3.tests.conftest#

Functions

model_config

model_pm_config

opt_model_config

param_groups_config

pytest_addoption

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